dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02460
Location and strand information: 13404 - 15314 (+)
Family: CBM22|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0892
Protein molecular weight: 70880.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02461
Location and strand information: 15565 - 16389 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02462
Location and strand information: 16386 - 17051 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02463
Location and strand information: 17248 - 19344 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.7495
Protein molecular weight: 77978.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02464
Location and strand information: 19323 - 21080 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5542
Protein molecular weight: 64985.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02465
Location and strand information: 21240 - 21383 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02466
Location and strand information: 21322 - 22695 (+)
Family: 2.A.1.1.74
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02467
Location and strand information: 22679 - 24766 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6207
Protein molecular weight: 79661.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02468
Location and strand information: 24763 - 27405 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6036
Protein molecular weight: 99759.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02469
Location and strand information: 27572 - 31615 (+)
Family: CBM57|GH2|GH137
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.2653
Protein molecular weight: 153999.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02470
Location and strand information: 31786 - 34884 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6173
Protein molecular weight: 117251.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02471
Location and strand information: 35002 - 37815 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.2871
Protein molecular weight: 105688.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02472
Location and strand information: 37812 - 40967 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5448
Protein molecular weight: 118420.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02473
Location and strand information: 41105 - 42508 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001042_107|CGC1
Gene ID: MGYG000001042_02474
Location and strand information: 42600 - 43955 (-)
Family: 2.A.66.1.37
Protein type: TC
Protein description: Multidrug export protein MepA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001042_02460
MGYG000001042_02463	GH127_e2\|3.2.1.-	carrageenan
MGYG000001042_02464	GH141_e0\|3.2.1.51	pectin
MGYG000001042_02467	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000001042_02468	GH138_e0\|3.2.1.-
MGYG000001042_02469	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000001042_02470	GH2_e119
MGYG000001042_02471	GH2_e77\|3.2.1.-	pectin
MGYG000001042_02472	GH106_e13\|3.2.1.40	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001042_02460	hypothetical protein	CAZyme	13404	15314	+	CBM22\| GH10
MGYG000001042_02461	hypothetical protein	null	15565	16389	+	AP_endonuc_2
MGYG000001042_02462	hypothetical protein	null	16386	17051	+	DUF3826
MGYG000001042_02463	Non-reducing end beta-L-arabinofuranosidase	CAZyme	17248	19344	+	GH127
MGYG000001042_02464	hypothetical protein	CAZyme	19323	21080	+	GH141
MGYG000001042_02465	hypothetical protein	null	21240	21383	+	No domain
MGYG000001042_02466	hypothetical protein	TC	21322	22695	+	2.A.1.1.74
MGYG000001042_02467	hypothetical protein	CAZyme	22679	24766	+	GH78
MGYG000001042_02468	hypothetical protein	CAZyme	24763	27405	+	GH138
MGYG000001042_02469	Beta-galactosidase	CAZyme	27572	31615	+	CBM57\| GH2\| GH137
MGYG000001042_02470	Beta-galactosidase	CAZyme	31786	34884	+	GH2
MGYG000001042_02471	Evolved beta-galactosidase subunit alpha	CAZyme	35002	37815	+	GH2
MGYG000001042_02472	hypothetical protein	CAZyme	37812	40967	+	GH106
MGYG000001042_02473	hypothetical protein	null	41105	42508	+	SASA
MGYG000001042_02474	Multidrug export protein MepA	TC	42600	43955	-	2.A.66.1.37
Protein ID	Protein Name	Type	Start	End	Strand	Signature